Site Map

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Introduction

The active pages on the Wiki are listed below. The top level pages, (= the navigation bar) are on the left hand side, with the links to direct descendants shown to the right. Many other links exist in the system but are difficult to display in this format. Entries marked with a blue asterisk (*) are partially completed, entries marked with a red asterisk (*) are still to do.

The Project

Level 1 Level 2 Level 3
Overview
Project History => => Progress (EOSC Life)
Related Initiatives*
Publications*
(Site Map)
Contact us*

Metadata schemas

Level 1 Level 2 Level 3
Overview => => Metadata Change History => JSON files v4 to v5 changes
=> Study JSON v4, => Data Object JSON v4
=> JSON files v3 to v4 changes=>
=> Study JSON v3, => Data Object JSON v3
=> JSON files v2 to v3 changes
=> Study JSON v2, => Data Object JSON v2
=> JSON files v1 to v2 changes
=> Study JSON v1, => Data Object JSON v1
Summary Tables
Schema Description
Study schema JSON
Object schema JSON

Data Extraction

Level 1 Level 2 Level 3
Overview
Data Structures => => SD table creation code
=> AD table creation code
Logging & Tracking
Downloading Data
PIDs and Hashes
Harvesting Data
Contextual Data => => study attributes
=> study features
=> study_relationship_types
=> object_classes
=> object_types
=> object_filter_types
=> object_access_types
=> object_instance_types
=> object_relationship_types
=> contribution_types
=> dataset_consent_types
=> dataset_de-identification_levels
=> dataset_record_key_types
=> date_types
=> description_types
=> doi_status_types
=> identifier_types
=> language_codes
=> language_usage_types
=> resource_types
=> title_types
=> topic_types
=> topic_vocabularies
=> units
=> composite_hash_types
Importing Data
Study-study links
PubMed Data => => PubMed Data Structure
Aggregating Data
Data Sources => => ClinicalTrials.gov SourceMetadata

The Portal

Level 1 Level 2 Level 3
Functionality*
Technologies*
Indexing with ES*
User Guide*
Elastic Search API*
GraphQL API*